数据准备

测试数据下载

测试数据 - md5: 208efa2d39d5190abec986e9b25aa685(物种:小鼠)

wget -c -O demo.tar "https://seekgene-public.oss-cn-beijing.aliyuncs.com/software/data/demodata/space/demo.tar"
# decompress
tar xf demo.tar
curl -C - -o demo.tar "https://seekgene-public.oss-cn-beijing.aliyuncs.com/software/data/demodata/space/demo.tar"
# decompress
tar xf demo.tar

参考基因组下载和构建

Download-mouse-reference-mm10 - md5: 5d3f8ee65f75f8143ec88f77b1821fd8

wget -c -O mm10.tar.gz "https://seekgene-public.oss-cn-beijing.aliyuncs.com/software/data/reference/mm10.tar.gz"
# decompress
tar -zxvf mm10.tar.gz
curl -C - -o mm10.tar.gz "https://seekgene-public.oss-cn-beijing.aliyuncs.com/software/data/reference/mm10.tar.gz"
# decompress
tar -zxvf mm10.tar.gz

参考基因组的构建可以参考如何构建参考基因组?